PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004493285.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family G2-like
Protein Properties Length: 279aa    MW: 30646.1 Da    PI: 6.3202
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004493285.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.72.6e-3346100155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k+rlrWt++LH+rFv+a++qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  XP_004493285.1  46 KQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRL 100
                     79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.88443103IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.9E-3244101IPR009057Homeodomain-like
SuperFamilySSF466893.4E-1745100IPR009057Homeodomain-like
TIGRFAMsTIGR015574.5E-2646101IPR006447Myb domain, plants
PfamPF002491.4E-74899IPR001005SANT/Myb domain
PfamPF143796.6E-24135180IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MYHAKKFPQA TMVPHKSQGG AEQLANVGVL NGSAVKNVAP AGGSGKQRLR WTSDLHDRFV  60
DAITQLGGPD RATPKGVLRV MGVPGLTIYH VKSHLQKYRL AKYLPESPAD GKDSKDEKRN  120
SGDSNSGAES SPGLQINDAL RMQMEVQKRL HEQLEVQKQL QMRIEAQGKY LQKIIEEQQK  180
LGSTLTASET FPLPHEKQNH PQSEPSGSSD ALADTFSPLK KQRIDEGSKD GFDASQVPRK  240
TAQKNDCNVG LMDPNLYGDD AGLGFDLETE NEEDNESEQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ0073110.0HQ007311.1 Glycine max cultivar Jidou11 MYB transcription factor (PHR1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004493285.10.0PREDICTED: protein PHR1-LIKE 1-like isoform X1
SwissprotQ8GUN54e-49PHL1_ARATH; Protein PHR1-LIKE 1
TrEMBLA0A151TAH91e-178A0A151TAH9_CAJCA; Myb family transcription factor APL
STRINGGLYMA19G30220.11e-168(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130132330
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.18e-72G2-like family protein